io.github.bothlab.omerewriter

View and rewrite OME-TIFF metadata
 
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OME Rewriter is a tool for editing metadata fields in OME-TIFF files.
It can also rewrite plain TIFF files into standards-compliant OME-TIFF
files with rich microscope metadata.

Features include:

  • Open and inspect OME-TIFF files, including multi-channel, Z-stack, and time-series images
  • Edit physical voxel sizes, numerical aperture, lens immersion medium, and embedding medium
  • Edit per-channel parameters: microscope type, excitation/emission wavelengths, and pinhole size
  • Rewrite ScanImage TIFF files as standards-compliant OME-TIFF files
  • Save and reload parameter sets (JSON) for quick re-use across acquisitions