kleborate-examples

tool to screen Klebsiella genome assemblies (example data)
  https://github.com/katholt/Kleborate
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Kleborate is a tool to screen Klebsiella genome assemblies for:

* MLST sequence type * species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.) * ICEKp associated virulence loci: yersiniabactin (ybt), colibactin (clb) * virulence plasmid associated loci: salmochelin (iro), aerobactin (iuc), hypermucoidy (rmpA, rmpA2) * antimicrobial resistance genes, including quinolone resistance SNPs and colistin resistance truncations * K (capsule) and O antigen (LPS) serotype prediction, via wzi alleles and Kaptive

This package provides example data end tests that are used in autopkgtest.