python-mzml

mzML mass spectrometric data parsing
  http://pymzml.github.com/
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Python-mzml is an extension to Python that offers:
- easy access to mass spectrometry (MS) data that allows
the rapid development of tools;
- a very fast parser for mzML data, the standard in
mass spectrometry data format;
- a set of functions to compare or handle spectra.