NiPy is a Python-based framework for the analysis of structural and functional neuroimaging data. It provides functionality for
- General linear model (GLM) statistical analysis
- Combined slice time correction and motion correction
- General image registration routines with flexible cost functions,
optimizers and re-sampling schemes
- Image segmentation
- Basic visualization of results in 2D and 3D
- Basic time series diagnostics
- Clustering and activation pattern analysis across subjects
- Reproducibility analysis for group studies