HTSeq can be used to performing a number of common analysis tasks when working with high-throughput genome sequencing reads:

* Getting statistical summaries about the base-call quality scores to study the data quality. * Calculating a coverage vector and exporting it for visualization in a genome browser. * Reading in annotation data from a GFF file. * Assigning aligned reads from an RNA-Seq experiments to exons and genes.

This package contains the Python 3 module.