python3-nanomath

simple math function for other Oxford Nanopore processing scripts
  https://github.com/wdecoster/nanomath
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This Python3 module provides a few simple math and statistics functions for other scripts processing Oxford Nanopore sequencing data.

* Calculate read N50 from a set of lengths get_N50(readlenghts) * Remove extreme length outliers from a dataset remove_length_outliers(dataframe, columname) * Calculate the average Phred quality of a read ave_qual(qualscores) * Write out the statistics report after calling readstats function write_stats(dataframe, outputname) * Compute a number of statistics, return a dictionary calc_read_stats(dataframe)