python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  https://pysam.readthedocs.org/en/latest
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Pysam is a Python module for reading and manipulating Samfiles. It's a lightweight wrapper of the samtools C-API. Pysam also includes an interface for tabix.

This package installs the module for Python 3.