r-bioc-genomeinfodb

BioConductor utilities for manipulating chromosome identifiers
  https://bioconductor.org/packages/GenomeInfoDb/
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This package contains BioConductor utilities for manipulating chromosome and other 'seqname' identifiers.

The Seqnames package contains data and functions that define and allow translation between different chromosome sequence naming conventions (e.g., "chr1" versus "1"), including a function that attempts to place sequence names in their natural, rather than lexicographic, order.