rdp-readseq

Ribosomal Database Project (RDP) sequence reading and writing
  https://github.com/rdpstaff/ReadSeq
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Rdp-readseq is a simple user interface to the sequence reading library developed by the Ribosomal Database Project. It can handle genbank, embl, fasta, fastq, sff and sto files. It can read from files or streams, and can handle indexing files.

The package also contains the ReadSeq Java library which is used by other RDP tools.